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Brain-map>Community Partnerships>Community Tools>Visualization>Cytosplore Viewer
Visualization

Cytosplore Viewer

Cytosplore Viewer is an interactive visual analysis tool which allows for an interactive exploration of hierarchies of cell types. One can visualize transcriptome-wide gene expression in combination with metadata of individual cells, perform differential analyses and statistics between manual selections of cells, or between pre-defined clusters throughout the cellular hierarchy and more.

Link to the tool | Relevant publication

More information

  • RRID:SCR_018330
  • Software Type:visualization tool
  • Modality:cell types
  • Allen Resource(s) Utilized:Allen Cell Types Database
  • Author(s):Leiden Computational Biology Center
  • Year Released:2018

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