Human M1 10x

This data set includes single-nucleus transcriptomes from 76,533 total nuclei derived from 2 post-mortem human brain specimens, to survey cell type diversity in the primary motor cortex (M1C or M1). In total, 127 transcriptomic cell types were identified. 

This research was supported by the National Institute Of Mental Health of the National Institutes of Health under Award Number U01MH114812. The content on this page is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

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File

Size

Type

Description

12 KB

.txt

Read-me file with additional information about the other files in this directory.

23 MB

.csv

Metadata about cells. Each entry has an _order, _ label, and _ color column.

7 GB

.csv

Gene expression matrix provided as a .csv.

400 KB

.json

Serialized cluster hierarchy with all node information embedded.

7 KB

.RDS

Cluster hierarchy with node information.

1 KB

.txt

Metadata about the taxonomy.

30 MB

.csv

Gene expression aggregated per cell type, calculated as trimmed means.

27 MB

.csv

Gene expression aggregated per cell type, calculated as medians.

5 MB

.csv

TSNE coordinates for each cell, as shown in the Transcriptomics Explorer.

600 KB

.csv

Mapping between sample ids in metadata above and exp_component_ id referenced in supplementary materials in related publication.