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Brain-map>Support>Community Tools>ABAEnrichment>ABAEnrichment
Data Analysis

ABAEnrichment

ABAEnrichment is an R package that tests for expression enrichment in specific brain regions at different developmental stages using expression information gathered from multiple regions of the adult and developing human brain, together with ontologically organized structural information about the brain, both provided by the Allen Brain Atlas. We validate ABAEnrichment by successfully recovering the origin of gene sets identified in specific brain cell-types and developmental stages.

Link to the tool | Relevant publication

More information

  • RRID:SCR_023814
  • Software Type:data analysis software
  • Modality:gene expression
  • Allen Resource(s) Utilized:Allen Human Brain Atlas, Allen Developing Human Brain Atlas, Brain Explorer
  • Author(s):Steffi Grote, Kay Prufer, Janet Lelso, Michael Dannemann
  • Year Released:2016

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