Skip to main content
Brain Knowledge Platform
Atlases
Our Research
Support
Search
Search
Brain Knowledge Platform
Atlases
Our Research
Support
Brain-map>Support>Community Tools>Alleninf>Alleninf
Data Analysis

Alleninf

Alleninf is a method to test hypotheses about the relation of patterns found in statistical maps with gene expression measured in postmortem brains. This software also refines the corregistration coordinates provided by the Allen Institute.

Link to the tool | Relevant publication

More information

  • RRID:SCR_023837
  • Software Type:data analysis software
  • Modality:gene expression
  • Allen Resource(s) Utilized:Allen Human Brain Atlas
  • Author(s):Krzysztof J Gorgolewski, Andrew S Fox, Luke Chang, Alexander Schäfer, Katrin Arélin
  • Year Released:2018

Explore More Resources

Brain Street View
Brain Street View

Load and plot Allen Connectivity Data in MATLAB

ElecFeX (Electrophysiological Feature eXtraction)
ElecFeX (Electrophysiological Feature eXtraction)

ElecFeX is a MATLAB-based toolbox for extracting electrical features from current-clamp recordings. It has a graphical user interface enabling an effortless batch analysis for electrophysiologists. Supported data formats include ABF, IBW, DAT, and NWB.

Allen Density Vectors
Allen Density Vectors

AllenDensityVectors contains the commands to establish direction vectors (3d unit vectors associated to voxels of a brain region) for the cerebellum, the isocortex, and the thalamus of the AIBS P56 mouse brain.