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Brain-map>Support>Community Tools>Brainreg>Brainreg
Processing, Registration, Integration

Brainreg

Brainreg is a Python based tool that registers the template brain (e.g. from the Allen Reference Atlas) to the sample image. This is an automated registration process which is compatible with multiple atlases and species.

Link to the tool

More information

  • RRID:SCR_023858
  • Software Type:data registration
  • Modality:brain imaging
  • Allen Resource(s) Utilized:Allen Mouse Brain Reference Atlas, Allen Human Brain Atlas
  • Author(s):Adam Tyson, Charly Rousseau
  • Year Released:2020

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