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Brain-map>Support>Community Tools>Process Genes List>Process Genes List
Processing, Registration, Integration

Process Genes List

ProcessGeneLists (PGL) is an R package which links genetics and human brain imaging by using genes associated with a disease and calculating a normalized mRNA expression average of those genes in each brain region. By uploading lists of genes and brain regions of interest, this package will return a csv with the results.

Link to the tool | Relevant publication

More information

  • RRID:SCR_023823
  • Software Type:data integration, data analysis software
  • Modality:gene expression, neuroanatomy
  • Allen Resource(s) Utilized:Allen Human Brain Atlas
  • Author(s):Guillermo F. Pollete, Savannah N. Gosnell, Matthew Meyer, Mary Fang, Tien Nquyen, Michelle A. Patriquin, David Nielsen, Thomas Kosten, Ramiro Salas
  • Year Released:2023

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