Documentation: Cell Types Database

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Document Collection

Available Files

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Description of methods for single cell RNA isolation and sequence analysis

Summary of tissue donor qualification process and information about each donor

Recognition of collaborators and others who provided assistance

Description of the biophysically realistic, single-neuron models with active conductances everywhere (all-active)

Description of the biophysically realistic, single-neuron models with passive dendrites and active soma (perisomatic)

Description of methods for histological staining, image acquisition, 3D reconstruction and structure-based categorization

Overview of methods for the Cell Types database

Description of methods for tissue processing, electrophysiology data acquisition, and analysis of intrinsic properties

Description of the generalized leaky integrate-and-fire single-neuron models

Overview of the design and implementation of the Allen Mouse Common Coordinate Framework

API

Cell Types Database API

Learn about Cell Types Database API with comprehensive guides and examples from Allen Institute for Brain Science.

Documentation

Cell Types Database Transcriptomics

Learn about Cell Types Database Transcriptomics with comprehensive guides and examples from Allen Institute for Brain Science.

Documentation

Cell Types Database Physiology And Morphology

Learn about Cell Types Database Physiology And Morphology with comprehensive guides and examples from Allen Institute for Brain Science.