Overview

This study used single cell and spatial genomics tools alongside quantitative neuropathology to understand the impact of Alzheimer's disease progression on cell types in middle temporal gyrus and dorsolateral prefrontal cortex. We mapped >1.2 million cells per region from 84 aged donors to 125 transcriptional types and showed which cell types changed in their abundance and gene expression with increasing disease pathology. This manuscript accompanies a freely available public resource to explore these data and to accelerate progress in AD research at SEA-AD.org.

Taxonomy Name: 20230505_SEAAD-Adult_Human_MTG_10X

Taxonomy Description: MTG - 10x SEA-AD

Species: Human

Version: 1.0.0

CCN Number: CCN20230505

AIT Number: 31

Resources

Download the Data

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Publication

Integrated multimodal cell atlas of Alzheimer’s disease

ABC Atlas

Explore the single-nucleus transcriptomics data

Explore the spatial transcriptomics data

MapMyCells

Label your data using the human MTG taxonomy as a reference

Additional Resources

Explore the data using the Transcriptomics Explorer

Explore More Resources

Human
Human MTG SMART-Seq Taxonomy

Taxonomy of human middle temporal gyrus generated with SMART-seq data in 2019

Human
Human Neocortex Taxonomy

This study used single cell transcriptomics and performed cellular characterization of eight areas in human neocortex to better understand cortical areal specialization.

Human
Whole Human Brain Taxonomy

This study used single-nucleus RNA sequencing to systematically survey cells across the entire adult human brain.